Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim39Q9ESN2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Gm24694-201ENSMUST00000180054 110 ntBASIC12.29□□□□□ -0.44
Trim39Q9ESN2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Gm27663-201ENSMUST00000184839 110 ntBASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Gm18905-201ENSMUST00000205454 928 ntBASIC12.29□□□□□ -0.44
Trim39Q9ESN2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.29□□□□□ -0.44
Trim39Q9ESN2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Syt7-204ENSMUST00000223586 1344 ntBASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim39Q9ESN2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.28□□□□□ -0.44
Trim39Q9ESN2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms