Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Gm24548-201ENSMUST00000158650 108 ntBASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Gm6007-201ENSMUST00000208170 823 ntBASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Acot6-202ENSMUST00000222921 3622 ntBASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube3bQ9ES34 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gm5781-201ENSMUST00000219792 443 ntBASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.53■□□□□ 0.08
Ube3bQ9ES34 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Gm27501-201ENSMUST00000183599 107 ntBASIC15.52■□□□□ 0.08
Ube3bQ9ES34 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC15.52■□□□□ 0.08
Ube3bQ9ES34 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.52■□□□□ 0.08
Ube3bQ9ES34 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.52■□□□□ 0.08
Ube3bQ9ES34 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms