Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tubb3Q9ERD7 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.02□□□□□ -0.32
Tubb3Q9ERD7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tubb3Q9ERD7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Tubb3Q9ERD7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tubb3Q9ERD7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tubb3Q9ERD7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Tubb3Q9ERD7 Pck2-205ENSMUST00000226352 2784 ntBASIC13.02□□□□□ -0.32
Tubb3Q9ERD7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Gm13829-201ENSMUST00000119600 138 ntBASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Gm17150-201ENSMUST00000165577 381 ntBASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Gm27892-201ENSMUST00000185017 106 ntBASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tubb3Q9ERD7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Gm6266-201ENSMUST00000203844 806 ntBASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Gm17794-201ENSMUST00000220252 955 ntBASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubb3Q9ERD7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms