Protein–RNA interactions for Protein: Q9EQ41

Vmn1r29, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r29Q9EQ41 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmn1r29Q9EQ41 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Gm19931-201ENSMUST00000198920 368 ntBASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmn1r29Q9EQ41 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Vmn1r29Q9EQ41 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Vmn1r29Q9EQ41 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vmn1r29Q9EQ41 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vmn1r29Q9EQ41 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vmn1r29Q9EQ41 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gm27838-201ENSMUST00000184829 128 ntBASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vmn1r29Q9EQ41 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.13□□□□□ -0.47
Vmn1r29Q9EQ41 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.13□□□□□ -0.47
Vmn1r29Q9EQ41 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmn1r29Q9EQ41 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vmn1r29Q9EQ41 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vmn1r29Q9EQ41 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmn1r29Q9EQ41 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vmn1r29Q9EQ41 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms