Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf6Q9DBU5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf6Q9DBU5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Mir686-201ENSMUST00000102174 109 ntBASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Gm11814-201ENSMUST00000119515 929 ntBASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Gm28693-202ENSMUST00000190758 331 ntBASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf6Q9DBU5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Gm37922-201ENSMUST00000195596 455 ntBASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms