Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Gm11803-201ENSMUST00000119966 444 ntBASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Gm5186-201ENSMUST00000218781 920 ntBASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm16202-201ENSMUST00000117532 544 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm27847-201ENSMUST00000183711 107 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm27375-201ENSMUST00000183799 107 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm18187-201ENSMUST00000196476 984 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2aQ9DB34 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Gm11814-201ENSMUST00000119515 929 ntBASIC13.65□□□□□ -0.22
Chmp2aQ9DB34 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms