Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp4cQ9D7F7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp4cQ9D7F7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp4cQ9D7F7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp4cQ9D7F7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Gm15920-201ENSMUST00000118998 402 ntBASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Gm11524-201ENSMUST00000119349 807 ntBASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp4cQ9D7F7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Gm14057-201ENSMUST00000120631 482 ntBASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Gm24447-201ENSMUST00000083977 338 ntBASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp4cQ9D7F7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Gm45841-201ENSMUST00000207700 164 ntBASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp4cQ9D7F7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms