Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.04□□□□□ -0.16
Mms19Q9D071 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mms19Q9D071 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mms19Q9D071 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mms19Q9D071 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Mms19Q9D071 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mms19Q9D071 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Mir874-201ENSMUST00000104769 76 ntBASIC14.03□□□□□ -0.16
Mms19Q9D071 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.03□□□□□ -0.16
Mms19Q9D071 Mir1982-201ENSMUST00000157368 74 ntBASIC14.03□□□□□ -0.16
Mms19Q9D071 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.03□□□□□ -0.16
Mms19Q9D071 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.03□□□□□ -0.16
Mms19Q9D071 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.03□□□□□ -0.16
Mms19Q9D071 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.03□□□□□ -0.16
Mms19Q9D071 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.03□□□□□ -0.16
Mms19Q9D071 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Mms19Q9D071 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mms19Q9D071 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mms19Q9D071 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.02□□□□□ -0.16
Mms19Q9D071 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Mms19Q9D071 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.02□□□□□ -0.17
Mms19Q9D071 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Gm16202-201ENSMUST00000117532 544 ntBASIC14.02□□□□□ -0.17
Mms19Q9D071 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.02□□□□□ -0.17
Mms19Q9D071 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Mms19Q9D071 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.02□□□□□ -0.17
Mms19Q9D071 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Mms19Q9D071 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.02□□□□□ -0.17
Mms19Q9D071 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.02□□□□□ -0.17
Mms19Q9D071 Gm45841-201ENSMUST00000207700 164 ntBASIC14.02□□□□□ -0.17
Mms19Q9D071 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.02□□□□□ -0.17
Mms19Q9D071 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mms19Q9D071 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.01□□□□□ -0.17
Mms19Q9D071 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.01□□□□□ -0.17
Mms19Q9D071 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.01□□□□□ -0.17
Mms19Q9D071 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.01□□□□□ -0.17
Mms19Q9D071 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mms19Q9D071 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.01□□□□□ -0.17
Mms19Q9D071 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.01□□□□□ -0.17
Mms19Q9D071 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.01□□□□□ -0.17
Mms19Q9D071 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms