Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Gm28630-201ENSMUST00000187806 498 ntBASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Gm5312-201ENSMUST00000203728 547 ntBASIC12.11□□□□□ -0.47
Trim13Q9CYB0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim13Q9CYB0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm14701-201ENSMUST00000117156 348 ntBASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm25927-201ENSMUST00000175058 117 ntBASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm45841-201ENSMUST00000207700 164 ntBASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim13Q9CYB0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms