Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.99□□□□□ -0.33
Ssu72Q9CY97 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Matn2-203ENSMUST00000226766 3252 ntBASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssu72Q9CY97 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Gm4875-201ENSMUST00000118257 786 ntBASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssu72Q9CY97 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Gm11978-201ENSMUST00000122315 466 ntBASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Gm43094-201ENSMUST00000196549 921 ntBASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms