Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.4■□□□□ 0.06
Smc3Q9CW03 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.4■□□□□ 0.06
Smc3Q9CW03 Gm26315-201ENSMUST00000083890 321 ntBASIC15.4■□□□□ 0.06
Smc3Q9CW03 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Smc3Q9CW03 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
Smc3Q9CW03 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.39■□□□□ 0.05
Smc3Q9CW03 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Gm22189-201ENSMUST00000103822 86 ntBASIC15.39■□□□□ 0.05
Smc3Q9CW03 Gm6447-201ENSMUST00000118905 835 ntBASIC15.39■□□□□ 0.05
Smc3Q9CW03 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.39■□□□□ 0.05
Smc3Q9CW03 Gm44872-201ENSMUST00000207864 420 ntBASIC15.39■□□□□ 0.05
Smc3Q9CW03 Gm5867-201ENSMUST00000063197 592 ntBASIC15.39■□□□□ 0.05
Smc3Q9CW03 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.39■□□□□ 0.05
Smc3Q9CW03 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Syt7-204ENSMUST00000223586 1344 ntBASIC15.39■□□□□ 0.05
Smc3Q9CW03 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smc3Q9CW03 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smc3Q9CW03 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.38■□□□□ 0.05
Smc3Q9CW03 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.38■□□□□ 0.05
Smc3Q9CW03 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Gm5354-201ENSMUST00000182417 973 ntBASIC15.38■□□□□ 0.05
Smc3Q9CW03 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Gm7730-201ENSMUST00000212486 454 ntBASIC15.38■□□□□ 0.05
Smc3Q9CW03 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smc3Q9CW03 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms