Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gm37055-201ENSMUST00000191866 133 ntBASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gm17808-201ENSMUST00000200859 894 ntBASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 AC154757.1-201ENSMUST00000228289 336 ntBASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm15372-201ENSMUST00000120729 834 ntBASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 AA543401-201ENSMUST00000164248 1269 ntBASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm9484-201ENSMUST00000195892 1159 ntBASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm13294-201ENSMUST00000121757 1330 ntBASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chchd1Q9CQA6 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chchd1Q9CQA6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms