Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Gm5687-201ENSMUST00000118252 640 ntBASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Gm10576-201ENSMUST00000191927 825 ntBASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Gm15823-201ENSMUST00000064305 670 ntBASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim11Q99PQ2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Gm5866-201ENSMUST00000177881 973 ntBASIC14.91□□□□□ -0.02
Trim11Q99PQ2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim11Q99PQ2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms