Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trim33Q99PP7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.05□□□□□ -0.32
Trim33Q99PP7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim33Q99PP7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.04□□□□□ -0.32
Trim33Q99PP7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.04□□□□□ -0.32
Trim33Q99PP7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.04□□□□□ -0.32
Trim33Q99PP7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm8463-201ENSMUST00000208573 613 ntBASIC13.04□□□□□ -0.32
Trim33Q99PP7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.04□□□□□ -0.32
Trim33Q99PP7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.04□□□□□ -0.32
Trim33Q99PP7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim33Q99PP7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Gm12928-201ENSMUST00000117115 573 ntBASIC13.03□□□□□ -0.32
Trim33Q99PP7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim33Q99PP7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.03□□□□□ -0.32
Trim33Q99PP7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim33Q99PP7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.03□□□□□ -0.32
Trim33Q99PP7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms