Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Mir7070-201ENSMUST00000183657 86 ntBASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim34aQ99PP6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Trim34aQ99PP6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim34aQ99PP6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim34aQ99PP6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Trim34aQ99PP6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.08■□□□□ 0.17
Trim34aQ99PP6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim34aQ99PP6 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm23270-201ENSMUST00000104055 131 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm23363-201ENSMUST00000175024 79 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm19931-201ENSMUST00000198920 368 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm5950-201ENSMUST00000213337 772 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim34aQ99PP6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.07■□□□□ 0.16
Trim34aQ99PP6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm18753-201ENSMUST00000201000 566 ntBASIC16.07■□□□□ 0.16
Trim34aQ99PP6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm13097-201ENSMUST00000210722 397 ntBASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim34aQ99PP6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.07■□□□□ 0.16
Trim34aQ99PP6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms