Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntnap4Q99P47 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntnap4Q99P47 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntnap4Q99P47 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntnap4Q99P47 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Gm11793-201ENSMUST00000120433 981 ntBASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.04□□□□□ -0.16
Cntnap4Q99P47 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cntnap4Q99P47 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm2383-201ENSMUST00000181461 807 ntBASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Mir6979-201ENSMUST00000183927 56 ntBASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntnap4Q99P47 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Cntnap4Q99P47 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.02□□□□□ -0.17
Cntnap4Q99P47 Gm11591-201ENSMUST00000120063 702 ntBASIC14.02□□□□□ -0.17
Cntnap4Q99P47 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cntnap4Q99P47 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.02□□□□□ -0.17
Cntnap4Q99P47 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cntnap4Q99P47 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.02□□□□□ -0.17
Cntnap4Q99P47 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cntnap4Q99P47 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.02□□□□□ -0.17
Cntnap4Q99P47 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms