Protein–RNA interactions for Protein: Q99NE9

Pbx4, Pre-B-cell leukemia transcription factor 4, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx4Q99NE9 Gm9996-201ENSMUST00000070359 913 ntBASIC14.19□□□□□ -0.14
Pbx4Q99NE9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pbx4Q99NE9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Gm23771-201ENSMUST00000178702 110 ntBASIC14.18□□□□□ -0.14
Pbx4Q99NE9 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Gm35713-201ENSMUST00000210516 199 ntBASIC14.18□□□□□ -0.14
Pbx4Q99NE9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pbx4Q99NE9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Gm14644-201ENSMUST00000116671 647 ntBASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Gm13937-201ENSMUST00000121000 988 ntBASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Gm5257-201ENSMUST00000121823 790 ntBASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Gm27910-201ENSMUST00000185004 107 ntBASIC14.17□□□□□ -0.14
Pbx4Q99NE9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pbx4Q99NE9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pbx4Q99NE9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pbx4Q99NE9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.16□□□□□ -0.14
Pbx4Q99NE9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pbx4Q99NE9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pbx4Q99NE9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pbx4Q99NE9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms