Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.71□□□□□ -0.37
Rnf111Q99ML9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf111Q99ML9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf111Q99ML9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Gm11524-201ENSMUST00000119349 807 ntBASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Gm15376-201ENSMUST00000122258 783 ntBASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Gm5354-201ENSMUST00000182417 973 ntBASIC12.7□□□□□ -0.38
Rnf111Q99ML9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Gm19078-201ENSMUST00000206311 727 ntBASIC12.7□□□□□ -0.38
Rnf111Q99ML9 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.7□□□□□ -0.38
Rnf111Q99ML9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms