Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab28Q99KL7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab28Q99KL7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab28Q99KL7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab28Q99KL7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab28Q99KL7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.65□□□□□ -0.39
Rab28Q99KL7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.64□□□□□ -0.39
Rab28Q99KL7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.64□□□□□ -0.39
Rab28Q99KL7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Gm7029-201ENSMUST00000173226 450 ntBASIC12.64□□□□□ -0.39
Rab28Q99KL7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.64□□□□□ -0.39
Rab28Q99KL7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.64□□□□□ -0.39
Rab28Q99KL7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab28Q99KL7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.63□□□□□ -0.39
Rab28Q99KL7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.63□□□□□ -0.39
Rab28Q99KL7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.63□□□□□ -0.39
Rab28Q99KL7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab28Q99KL7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.62□□□□□ -0.39
Rab28Q99KL7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Gm37042-201ENSMUST00000193816 581 ntBASIC12.62□□□□□ -0.39
Rab28Q99KL7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.62□□□□□ -0.39
Rab28Q99KL7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms