Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha8Q91Y12 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdha8Q91Y12 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Gm8515-201ENSMUST00000194852 576 ntBASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha8Q91Y12 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdha8Q91Y12 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms