Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm15376-201ENSMUST00000122258 783 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm36997-201ENSMUST00000195090 707 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm44837-201ENSMUST00000206863 717 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm5471-201ENSMUST00000072732 337 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm24239-201ENSMUST00000157791 255 ntBASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm38268-201ENSMUST00000195813 193 ntBASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Vmn1r89-206ENSMUST00000227319 985 ntBASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm5161-201ENSMUST00000075243 853 ntBASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm24447-201ENSMUST00000083977 338 ntBASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm43221-201ENSMUST00000197612 2071 ntBASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Gm12586-201ENSMUST00000117328 1316 ntBASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb20Q91XZ9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15806-201ENSMUST00000120696 955 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm9002-201ENSMUST00000178437 499 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms