Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Gm12106-201ENSMUST00000116006 1200 ntBASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Gm16177-201ENSMUST00000120728 718 ntBASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Gm37319-201ENSMUST00000193500 636 ntBASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Gm6266-201ENSMUST00000203844 806 ntBASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb22Q91XZ8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb22Q91XZ8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb22Q91XZ8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb22Q91XZ8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms