Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm6222-201ENSMUST00000120787 396 ntBASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm14767-201ENSMUST00000121559 586 ntBASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Mir8102-201ENSMUST00000184148 139 ntBASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm38294-201ENSMUST00000192831 381 ntBASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm5566-201ENSMUST00000116118 459 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm13823-201ENSMUST00000119930 345 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm9719-201ENSMUST00000162765 543 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Mir7684-201ENSMUST00000183858 60 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Mir6977-201ENSMUST00000184960 64 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm29310-201ENSMUST00000185468 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21825-201ENSMUST00000185728 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm29109-201ENSMUST00000185895 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21896-201ENSMUST00000186520 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21873-201ENSMUST00000186728 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21794-201ENSMUST00000187056 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21880-201ENSMUST00000187275 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21826-201ENSMUST00000187451 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21198-201ENSMUST00000188393 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21749-201ENSMUST00000189343 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21901-201ENSMUST00000189568 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm29424-201ENSMUST00000189716 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm28599-201ENSMUST00000189838 694 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21867-201ENSMUST00000189917 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm29269-201ENSMUST00000190087 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21722-201ENSMUST00000190153 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm28423-201ENSMUST00000190701 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21899-201ENSMUST00000190745 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21910-201ENSMUST00000191163 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21849-201ENSMUST00000191571 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm28678-201ENSMUST00000191593 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm20910-201ENSMUST00000193268 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm21871-201ENSMUST00000194621 696 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gm6312-201ENSMUST00000204060 1194 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 AC102542.1-201ENSMUST00000225204 1138 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb3Q91XZ7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms