Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trex1Q91XB0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trex1Q91XB0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trex1Q91XB0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trex1Q91XB0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trex1Q91XB0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trex1Q91XB0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trex1Q91XB0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Trex1Q91XB0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Gm13875-201ENSMUST00000120162 282 ntBASIC14.94□□□□□ -0.02
Trex1Q91XB0 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.94□□□□□ -0.02
Trex1Q91XB0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Gm16570-201ENSMUST00000161951 436 ntBASIC14.94□□□□□ -0.02
Trex1Q91XB0 Gm23363-201ENSMUST00000175024 79 ntBASIC14.94□□□□□ -0.02
Trex1Q91XB0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.94□□□□□ -0.02
Trex1Q91XB0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.94□□□□□ -0.02
Trex1Q91XB0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.94□□□□□ -0.02
Trex1Q91XB0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trex1Q91XB0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.93□□□□□ -0.02
Trex1Q91XB0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Gm23270-201ENSMUST00000104055 131 ntBASIC14.93□□□□□ -0.02
Trex1Q91XB0 Mir874-201ENSMUST00000104769 76 ntBASIC14.93□□□□□ -0.02
Trex1Q91XB0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Gm12997-201ENSMUST00000120207 640 ntBASIC14.93□□□□□ -0.02
Trex1Q91XB0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.93□□□□□ -0.02
Trex1Q91XB0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Gm22058-201ENSMUST00000083393 310 ntBASIC14.93□□□□□ -0.02
Trex1Q91XB0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trex1Q91XB0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.92□□□□□ -0.02
Trex1Q91XB0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trex1Q91XB0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms