Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Gm4984-201ENSMUST00000115987 360 ntBASIC12.99□□□□□ -0.33
Usb1Q91W78 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.99□□□□□ -0.33
Usb1Q91W78 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Gm27486-201ENSMUST00000184923 80 ntBASIC12.99□□□□□ -0.33
Usb1Q91W78 Gm7287-201ENSMUST00000205267 602 ntBASIC12.99□□□□□ -0.33
Usb1Q91W78 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.99□□□□□ -0.33
Usb1Q91W78 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Gm18041-201ENSMUST00000218210 618 ntBASIC12.99□□□□□ -0.33
Usb1Q91W78 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.99□□□□□ -0.33
Usb1Q91W78 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.99□□□□□ -0.33
Usb1Q91W78 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usb1Q91W78 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.99□□□□□ -0.33
Usb1Q91W78 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.98□□□□□ -0.33
Usb1Q91W78 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm42550-201ENSMUST00000201553 960 ntBASIC12.98□□□□□ -0.33
Usb1Q91W78 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.98□□□□□ -0.33
Usb1Q91W78 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Usb1Q91W78 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.98□□□□□ -0.33
Usb1Q91W78 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms