Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm2316-201ENSMUST00000190613 921 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm38341-201ENSMUST00000195357 515 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Cts7-204ENSMUST00000225321 1257 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.94□□□□□ -0.18
TraipQ8VIG6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.94□□□□□ -0.18
TraipQ8VIG6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.94□□□□□ -0.18
TraipQ8VIG6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TraipQ8VIG6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.93□□□□□ -0.18
TraipQ8VIG6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Gm11964-201ENSMUST00000120982 444 ntBASIC13.93□□□□□ -0.18
TraipQ8VIG6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Gm8738-201ENSMUST00000172606 329 ntBASIC13.93□□□□□ -0.18
TraipQ8VIG6 Gm37489-201ENSMUST00000191883 159 ntBASIC13.93□□□□□ -0.18
TraipQ8VIG6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Morn2-202ENSMUST00000227729 656 ntBASIC13.93□□□□□ -0.18
TraipQ8VIG6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TraipQ8VIG6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TraipQ8VIG6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.92□□□□□ -0.18
TraipQ8VIG6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms