Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkd2Q8VE28 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkd2Q8VE28 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Gm37424-201ENSMUST00000191727 561 ntBASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Gm29741-201ENSMUST00000192667 421 ntBASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Gm7561-201ENSMUST00000211203 886 ntBASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkd2Q8VE28 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm13392-201ENSMUST00000117708 150 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm12485-201ENSMUST00000119641 291 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm8062-201ENSMUST00000139696 444 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm8652-201ENSMUST00000181363 964 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm27731-201ENSMUST00000185192 107 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Gm44397-201ENSMUST00000195950 113 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkd2Q8VE28 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkd2Q8VE28 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkd2Q8VE28 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms