Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx39aQ8VDW0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Gm27243-201ENSMUST00000183964 521 ntBASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Gm24526-201ENSMUST00000082921 158 ntBASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.52□□□□□ -0.09
Ddx39aQ8VDW0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm13786-201ENSMUST00000122371 333 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm2991-201ENSMUST00000173338 480 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm38341-201ENSMUST00000195357 515 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm43758-201ENSMUST00000199500 367 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm18584-201ENSMUST00000203098 964 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx39aQ8VDW0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Ddx39aQ8VDW0 Gm8738-201ENSMUST00000172606 329 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms