Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.76□□□□□ -0.37
Q8VDP2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Q8VDP2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.76□□□□□ -0.37
Q8VDP2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Q8VDP2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Q8VDP2 Gm8344-201ENSMUST00000119813 856 ntBASIC12.75□□□□□ -0.37
Q8VDP2 Gm11594-201ENSMUST00000122313 162 ntBASIC12.75□□□□□ -0.37
Q8VDP2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.75□□□□□ -0.37
Q8VDP2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Q8VDP2 Gm8318-201ENSMUST00000182954 872 ntBASIC12.75□□□□□ -0.37
Q8VDP2 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.75□□□□□ -0.37
Q8VDP2 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.75□□□□□ -0.37
Q8VDP2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.75□□□□□ -0.37
Q8VDP2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.75□□□□□ -0.37
Q8VDP2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Q8VDP2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Q8VDP2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Q8VDP2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Q8VDP2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Q8VDP2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q8VDP2 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.74□□□□□ -0.37
Q8VDP2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Q8VDP2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.74□□□□□ -0.37
Q8VDP2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.74□□□□□ -0.37
Q8VDP2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Q8VDP2 Gm11779-201ENSMUST00000118541 368 ntBASIC12.74□□□□□ -0.37
Q8VDP2 Gm11764-201ENSMUST00000120221 623 ntBASIC12.74□□□□□ -0.37
Q8VDP2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.74□□□□□ -0.37
Q8VDP2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.74□□□□□ -0.37
Q8VDP2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.74□□□□□ -0.37
Q8VDP2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Q8VDP2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q8VDP2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Q8VDP2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.74□□□□□ -0.37
Q8VDP2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.74□□□□□ -0.37
Q8VDP2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Q8VDP2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Q8VDP2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.73□□□□□ -0.37
Q8VDP2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.73□□□□□ -0.37
Q8VDP2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.73□□□□□ -0.37
Q8VDP2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms