Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm1Q8VC85 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lsm1Q8VC85 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm1Q8VC85 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lsm1Q8VC85 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Lsm1Q8VC85 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Gm16215-201ENSMUST00000161990 637 ntBASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm1Q8VC85 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.55□□□□□ -0.4
Lsm1Q8VC85 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms