Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Gm27300-201ENSMUST00000184085 97 ntBASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Gm27335-201ENSMUST00000184758 97 ntBASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc9Q8VC31 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Gm10686-201ENSMUST00000215389 3247 ntBASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Btrc-209ENSMUST00000224478 2194 ntBASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Gm7063-201ENSMUST00000186840 981 ntBASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc9Q8VC31 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Gm43984-201ENSMUST00000204572 2864 ntBASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Gm14140-201ENSMUST00000119999 995 ntBASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Psmb5-202ENSMUST00000227257 622 ntBASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc9Q8VC31 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Ccdc9Q8VC31 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc9Q8VC31 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Ccdc9Q8VC31 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms