Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gm25144-201ENSMUST00000179561 110 ntBASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gm25352-201ENSMUST00000179815 110 ntBASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gm24447-201ENSMUST00000083977 338 ntBASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.68□□□□□ -0.7
Nup35Q8R4R6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Gm7774-201ENSMUST00000200064 533 ntBASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup35Q8R4R6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms