Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atf7Q8R0S1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm11618-201ENSMUST00000117946 267 ntBASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm8213-201ENSMUST00000118191 441 ntBASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm10156-201ENSMUST00000122364 462 ntBASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm28693-202ENSMUST00000190758 331 ntBASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Gm9794-201ENSMUST00000202370 423 ntBASIC15.43■□□□□ 0.06
Atf7Q8R0S1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.43■□□□□ 0.06
Atf7Q8R0S1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm6244-201ENSMUST00000178732 841 ntBASIC15.42■□□□□ 0.06
Atf7Q8R0S1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms