Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Gm14130-201ENSMUST00000118417 987 ntBASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Gm15276-201ENSMUST00000145953 498 ntBASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Gm6458-201ENSMUST00000211573 635 ntBASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shtn1Q8K2Q9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Gm23200-201ENSMUST00000104379 132 ntBASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Gm20426-201ENSMUST00000173657 440 ntBASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shtn1Q8K2Q9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Gm28450-201ENSMUST00000187349 638 ntBASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Gm19208-201ENSMUST00000213861 912 ntBASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shtn1Q8K2Q9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms