Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Rfwd3Q8CIK8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfwd3Q8CIK8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfwd3Q8CIK8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gm38671-201ENSMUST00000200573 130 ntBASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gm5035-201ENSMUST00000215581 927 ntBASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rfwd3Q8CIK8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Mir874-201ENSMUST00000104769 76 ntBASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms