Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.74□□□□□ -0.05
Syne4Q8CII8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.74□□□□□ -0.05
Syne4Q8CII8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.73□□□□□ -0.05
Syne4Q8CII8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gm45224-201ENSMUST00000208203 414 ntBASIC14.73□□□□□ -0.05
Syne4Q8CII8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.73□□□□□ -0.05
Syne4Q8CII8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syne4Q8CII8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.72□□□□□ -0.05
Syne4Q8CII8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Mir1943-201ENSMUST00000158276 73 ntBASIC14.72□□□□□ -0.05
Syne4Q8CII8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gm45118-201ENSMUST00000208928 825 ntBASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gm8913-201ENSMUST00000209491 641 ntBASIC14.72□□□□□ -0.05
Syne4Q8CII8 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gm10312-201ENSMUST00000078515 489 ntBASIC14.72□□□□□ -0.05
Syne4Q8CII8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syne4Q8CII8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms