Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm11222-201ENSMUST00000119005 738 ntBASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm12502-201ENSMUST00000120197 444 ntBASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm38341-201ENSMUST00000195357 515 ntBASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm45865-201ENSMUST00000211815 945 ntBASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm21769-201ENSMUST00000211922 111 ntBASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rab11fip3Q8CHD8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Gm13492-201ENSMUST00000119772 665 ntBASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Gm43758-201ENSMUST00000199500 367 ntBASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Cts7-204ENSMUST00000225321 1257 ntBASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab11fip3Q8CHD8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.89■□□□□ 0.3
Rab11fip3Q8CHD8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rab11fip3Q8CHD8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Morn2-202ENSMUST00000227729 656 ntBASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab11fip3Q8CHD8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Gm13350-201ENSMUST00000120519 479 ntBASIC16.88■□□□□ 0.29
Rab11fip3Q8CHD8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms