Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.19■□□□□ 0.18
Smc5Q8CG46 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Gm18263-201ENSMUST00000220846 1928 ntBASIC16.18■□□□□ 0.18
Smc5Q8CG46 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Gm42612-201ENSMUST00000197986 623 ntBASIC16.18■□□□□ 0.18
Smc5Q8CG46 Gm43170-201ENSMUST00000199827 612 ntBASIC16.18■□□□□ 0.18
Smc5Q8CG46 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.18■□□□□ 0.18
Smc5Q8CG46 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.18■□□□□ 0.18
Smc5Q8CG46 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc5Q8CG46 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.17■□□□□ 0.18
Smc5Q8CG46 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.17■□□□□ 0.18
Smc5Q8CG46 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Gm14350-201ENSMUST00000116642 640 ntBASIC16.17■□□□□ 0.18
Smc5Q8CG46 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.17■□□□□ 0.18
Smc5Q8CG46 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.17■□□□□ 0.18
Smc5Q8CG46 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smc5Q8CG46 Syt7-204ENSMUST00000223586 1344 ntBASIC16.17■□□□□ 0.18
Smc5Q8CG46 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.16■□□□□ 0.18
Smc5Q8CG46 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smc5Q8CG46 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Mir6956-201ENSMUST00000183598 62 ntBASIC16.16■□□□□ 0.18
Smc5Q8CG46 Mir8102-201ENSMUST00000184148 139 ntBASIC16.16■□□□□ 0.18
Smc5Q8CG46 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms