Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Gm9063-201ENSMUST00000223299 582 ntBASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28aQ8CEI3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc28aQ8CEI3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Gm14701-201ENSMUST00000117156 348 ntBASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28aQ8CEI3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc28aQ8CEI3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc28aQ8CEI3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms