Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.26■□□□□ 0.03
Vps53Q8CCB4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Gm24196-201ENSMUST00000179161 110 ntBASIC15.25■□□□□ 0.03
Vps53Q8CCB4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps53Q8CCB4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.24■□□□□ 0.03
Vps53Q8CCB4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm38223-201ENSMUST00000194484 695 ntBASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm44397-201ENSMUST00000195950 113 ntBASIC15.24■□□□□ 0.03
Vps53Q8CCB4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm43179-201ENSMUST00000198797 275 ntBASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm40466-201ENSMUST00000212174 422 ntBASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps53Q8CCB4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms