Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.7□□□□□ -0.38
SynpoQ8CC35 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
SynpoQ8CC35 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Mir1938-201ENSMUST00000158746 100 ntBASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm44397-201ENSMUST00000195950 113 ntBASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm38671-201ENSMUST00000200573 130 ntBASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm9899-201ENSMUST00000065519 555 ntBASIC12.7□□□□□ -0.38
SynpoQ8CC35 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SynpoQ8CC35 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.69□□□□□ -0.38
SynpoQ8CC35 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
SynpoQ8CC35 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.68□□□□□ -0.38
SynpoQ8CC35 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Gm12742-201ENSMUST00000117326 410 ntBASIC12.68□□□□□ -0.38
SynpoQ8CC35 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Gm27847-201ENSMUST00000183711 107 ntBASIC12.68□□□□□ -0.38
SynpoQ8CC35 Gm27375-201ENSMUST00000183799 107 ntBASIC12.68□□□□□ -0.38
SynpoQ8CC35 Gm45841-201ENSMUST00000207700 164 ntBASIC12.68□□□□□ -0.38
SynpoQ8CC35 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.68□□□□□ -0.38
SynpoQ8CC35 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SynpoQ8CC35 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms