Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm11803-201ENSMUST00000119966 444 ntBASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.44□□□□□ -0.1
Trim9Q8C7M3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm10012-201ENSMUST00000078252 192 ntBASIC14.44□□□□□ -0.1
Trim9Q8C7M3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Gm13123-201ENSMUST00000122173 492 ntBASIC14.43□□□□□ -0.1
Trim9Q8C7M3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim9Q8C7M3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Mir1894-201ENSMUST00000122802 81 ntBASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Gm8810-201ENSMUST00000172895 754 ntBASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Gm5356-201ENSMUST00000093326 615 ntBASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim9Q8C7M3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms