Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rft1Q8C3B8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.71□□□□□ -0.53
Rft1Q8C3B8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm7488-201ENSMUST00000117148 684 ntBASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Gm10766-202ENSMUST00000194123 606 ntBASIC11.71□□□□□ -0.53
Rft1Q8C3B8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.71□□□□□ -0.53
Rft1Q8C3B8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rft1Q8C3B8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rft1Q8C3B8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.7□□□□□ -0.54
Rft1Q8C3B8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.7□□□□□ -0.54
Rft1Q8C3B8 Gm5425-201ENSMUST00000214125 459 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms