Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps9d1Q8C190 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps9d1Q8C190 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps9d1Q8C190 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps9d1Q8C190 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps9d1Q8C190 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps9d1Q8C190 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps9d1Q8C190 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps9d1Q8C190 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.28□□□□□ -0.44
Vps9d1Q8C190 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm7488-201ENSMUST00000117148 684 ntBASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm15240-201ENSMUST00000118156 720 ntBASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm18905-201ENSMUST00000205454 928 ntBASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.28□□□□□ -0.44
Vps9d1Q8C190 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps9d1Q8C190 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.28□□□□□ -0.44
Vps9d1Q8C190 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps9d1Q8C190 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Gm11424-201ENSMUST00000121929 829 ntBASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Mir7221-201ENSMUST00000184009 72 ntBASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps9d1Q8C190 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms