Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC18.4■□□□□ 0.54
Usp47Q8BY87 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Gm6334-201ENSMUST00000207083 228 ntBASIC18.4■□□□□ 0.54
Usp47Q8BY87 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Gm17383-201ENSMUST00000078739 1041 ntBASIC18.4■□□□□ 0.54
Usp47Q8BY87 Gm37827-201ENSMUST00000194486 1542 ntBASIC18.4■□□□□ 0.54
Usp47Q8BY87 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp47Q8BY87 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Gm44851-201ENSMUST00000205735 2309 ntBASIC18.39■□□□□ 0.53
Usp47Q8BY87 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Gm16296-201ENSMUST00000159905 325 ntBASIC18.39■□□□□ 0.53
Usp47Q8BY87 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Usp47Q8BY87 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Gm18935-201ENSMUST00000212692 664 ntBASIC18.39■□□□□ 0.53
Usp47Q8BY87 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp47Q8BY87 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC18.38■□□□□ 0.53
Usp47Q8BY87 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Gm12502-201ENSMUST00000120197 444 ntBASIC18.38■□□□□ 0.53
Usp47Q8BY87 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp47Q8BY87 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Gm14921-201ENSMUST00000118643 908 ntBASIC18.37■□□□□ 0.53
Usp47Q8BY87 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Olfr582-201ENSMUST00000098212 960 ntBASIC18.37■□□□□ 0.53
Usp47Q8BY87 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms