Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Gm15376-201ENSMUST00000122258 783 ntBASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Gm19078-201ENSMUST00000206311 727 ntBASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Gm5186-201ENSMUST00000218781 920 ntBASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Gm12485-201ENSMUST00000119641 291 ntBASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Gm12341-201ENSMUST00000119724 503 ntBASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Gm9908-201ENSMUST00000211534 448 ntBASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trerf1Q8BXJ2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Gm15770-201ENSMUST00000117498 584 ntBASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Gm11524-201ENSMUST00000119349 807 ntBASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trerf1Q8BXJ2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms