Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.39□□□□□ -0.27
Sfr1Q8BP27 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Gm16372-201ENSMUST00000073088 450 ntBASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.39□□□□□ -0.27
Sfr1Q8BP27 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sfr1Q8BP27 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Pck2-205ENSMUST00000226352 2784 ntBASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Gm6447-201ENSMUST00000118905 835 ntBASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.37□□□□□ -0.27
Sfr1Q8BP27 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms