Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm29667-201ENSMUST00000190817 490 ntBASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.68□□□□□ -0.38
Rnf38Q8BI21 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.67□□□□□ -0.38
Rnf38Q8BI21 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf38Q8BI21 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Gm26464-201ENSMUST00000157094 305 ntBASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Gm20445-201ENSMUST00000061905 565 ntBASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf38Q8BI21 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms