Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Samm50Q8BGH2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.35■□□□□ 0.05
Samm50Q8BGH2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Samm50Q8BGH2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm15770-201ENSMUST00000117498 584 ntBASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms