Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Gm8652-201ENSMUST00000181363 964 ntBASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Gm5035-201ENSMUST00000215581 927 ntBASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Gm10012-201ENSMUST00000078252 192 ntBASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.35□□□□□ -0.43
Atg4bQ8BGE6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Gm11478-201ENSMUST00000117851 599 ntBASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Gm11803-201ENSMUST00000119966 444 ntBASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Gm10156-201ENSMUST00000122364 462 ntBASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4bQ8BGE6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Atg4bQ8BGE6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Atg4bQ8BGE6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Atg4bQ8BGE6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Gm8213-201ENSMUST00000118191 441 ntBASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Gm8810-201ENSMUST00000172895 754 ntBASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms